Nicotiana tabacumAssembly Name:Ntab-TN90
Gene File:GCF_000715135.1_Ntab-TN90_protein.faa.gz
| Position on the Genome | Gene Name | CDS | lcl|NW_015869052.1_cds_XP_016433647.1_29783 |
| PEP | XP_016433647.1 |
||
| Position on the Genome | Chromosome | NW_015869052.1 | |
| Start Position | 94732 | ||
| End Position | 102881 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00496818 |
|---|---|---|---|
| KusakiDB version | 2.0 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Rhamnogalacturonan lyase, domain II |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | Rhamnogalacturonan endolyase |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF14686,PF14683,PF06045 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR013784,IPR029413,IPR011013,IPR010325,IPR008979,IPR029411 |
||
| InterPro Description | Details | ||
| GO ID | GO:0005975,GO:0005576,GO:0030246,GO:0102210 |
||
| GO Description | Details | ||
| GOslim ID | GO:0016829,GO:0005576,GO:0005975,GO:0030246 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Nicotiana tabacum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
